PlantCV
Figure 1. Setaria viridis pseudocolored by value channel in HSV colorspace

Title

Dataset: A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria

License

Creative Commons License
Dataset: A Versatile Phenotyping System and Analytics Platform Reveals Diverse Temporal Responses to Water Availability in Setaria by Noah Fahlgren, Maximillian Feldman, Malia A. Gehan, Melinda S. Wilson, Christine Shyu, Douglas W. Bryant, Steven T. Hill, Colton J. McEntee, Sankalpi N. Warnasooriya, Indrajit Kumar, Tracy Ficor, Stephanie Turnipseed, Kerrigan B. Gilbert, Thomas P. Brutnell, James, C. Carrington, Todd C. Mockler, Ivan Baxter is licensed under a Creative Commons Attribution 4.0 International License.
Based on a work at https://doi.org/10.1016/j.molp.2015.06.005.

Dataset "fahlgren_et_al_2015_bellwether.tar.gz"

79,200 PNG images: Globus, CyVerse Data Commons

Dataset "fahlgren_et_al_2015_bellwether_jpeg.tar.gz"

79,200 PNG images: Globus

Dataset "Manual tiller count, tiller angle, and leaf angle measurements"

58 PNG images: Figshare, 1 TXT file: Figshare

Dataset "Manual height and tiller count measurements"

200 PNG images: Figshare, 1 TXT file: Figshare, 1 CSV file: Figshare

Dataset "Manual tiller count measurements"

646 PNG images: Figshare, 1 TXT file: Figshare

Dataset "Manual biomass measurements"

205 PNG images: Figshare, 1 CSV file: Figshare

Other datasets

Camera zoom calibration data: Figshare, Soil weight and volumetric water content: Figshare, Water treatment data: Figshare, PlantCV output data: Figshare, Plant trait data: Figshare

Citations

  1. Fahlgren N., Feldman M., Gehan MA., Wilson MS., Shyu C., Bryant DW., Hill ST., McEntee CJ., Warnasooriya SN., Kumar I., Ficor T., Turnipseed S., Gilbert KB., Brutnell TP., Carrington JC., Mockler TC., Baxter I. 2015. A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in Setaria. Molecular plant 8:1520–1535. DOI: 10.1016/j.molp.2015.06.005.
  2. Gehan M., Fahlgren N., Feldman M., Wilson M., Hill S., Bryant D., Ficor T., Turnipseed S., Warnasooriya S., Shyu C., Gilbert K., Kumar I., McEntee C., Brutnell TP., Carrington JC., Mockler TC., Baxter I. 2015. A versatile phenotyping system and analytics platform reveals diverse temporal responses to water limitation in Setaria. DOI: 10.6084/m9.figshare.1272859.v12.

Contact

Malia Gehan: mgehan@danforthcenter.org